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1. Installing rjava in r install#
2. Installing rjava in r upgrade#
3. Installing rjava in r full#
4. Installing rjava in r download#
5. Installing rjava in r windows#

I tried to follow these links, one and two but they didn't seem to resolve my issue there are more links on SO but I'm not sure which one to follow. Updating Java configuration in /usr/lib/R Gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector -param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c conftest.c -o conftest.oĬonftest.c:1:17: fatal error: jni.h: No such file or directory Which also gave the following error, trying to compile and link a JNI programĭetected JNI linker flags : -L/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/amd64/server -ljvm So, I went to the terminal and typed, sudo R CMD javareconf Installation of package ‘rJava’ had non-zero exit status

Installing rjava in r install#

To set all Java-related variables and then install rJava.ĮRROR: configuration failed for package ‘rJava’

Installing rjava in r full#

Make sure R is configured with full Java support (including JDK). Which returned the following error message, configure: error: One or more Java configuration variables are not set. I tried to install it again using, install.packages("rJava")

Installing rjava in r upgrade#

I'm using RStudio on and Ubuntu box (14.04) and I tried to upgrade rJava from sources and in the process I managed to lose it. Now you can install and load rJava package without any problem.I've tried to solve this using the previous questions/answers on SO but without any success. Note: jdk1.8.0_201 will be changed depending on the version of Java development kit In RStudio run Sys.setenv(JAVA_HOME="C:\\Program Files\\Java\\jdk1.8.0_201") To check the installation, open CMD\Type javac\Press Enter and

Installing rjava in r download#

Download Java development kit from for 64-bit windows\Install it.Download Java from for 64-bit windows\Install it.I have solved the problem using the following procedure

Installing rjava in r windows#

I was facing the same problem while using Windows 10. The Ubuntu packages solve some issues which I didn’t realize or appreciate. What I failed to appreciate initially is that installing packages using the Ubuntu apt-get method is fundamentally different than just loading the same package using install.packages() inside of R. I tried Dirk’s recommendation to use apt-get to install the rJava package. I recently ran into the same issue on a new Ubuntu install. I had initially solved this by editing my Java paths, as illustrated in the answer I posted below. It’s been a few months since I had this problem. The other thing I read was to run sudo R CMD javareconf which runs quite happily with no errors. When Googling around for the error I see that others are having the same issue but not finding a solution other than “install the whole JDK, not just the JRE” which I have done. Java(TM) SE Runtime Environment (build 1.6.0_20-b02) I have the Java JDK installed and java -version returns the following: $ java -version

You may need to use non-standard compiler flags or a different compiler in order to fix this.ĮRROR: configuration failed for package ‘rJava’

configure: error: One or more JNI types differ from the corresponding native type. When installing rJava using the install.packages("rJava") command I get the following error: checking Java support in R.